BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034D12SP1|AL429904
(841 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig423 1629 0.0
>3x_Contig423
Length = 2127
Score = 1629 bits (821), Expect = 0.0
Identities = 839/843 (99%), Gaps = 2/843 (0%)
Strand = Plus / Plus
Query: 1 attcatgcgttatagtcccatcaagttcatgtgccacattcactaaatcattgtagtatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 attcatgcgttatagtcccatcaagttcatgtgccacattcactaaatcattgtagtatt 759
Query: 61 ggaagctgttaggatatataaccataagtgaagatactgtatttgacgatgacgatgatg 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 ggaagctgtcaggatatataaccataagtgaagatactgtatttgacgatgacgatgatg 819
Query: 121 atgttagtaaagttgagaattaaagggaaaaaaaagggttaagaaaatccgtccttaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 atgttagtaaagttgagaattaaagggaaaaaaaagggttaagaaaatccgtccttaaac 879
Query: 181 atacacgaactggccaacgccg-ttccaataaaaataggtgcaaatctcatatctgcggc 239
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 880 atacacgaactggccaacgccggttccaataaaaataggtgcaaatctcatatctgcggc 939
Query: 240 taatgctttgttattactgttgctactctattctttgttcttgctaacaatctcccttat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 taatgctttgttattactgttgctactctattctttgttcttgctaacaatctcccttat 999
Query: 300 ccttcatatatcatgattcattattcttttatatggatatcatatctcatagtgagtatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 ccttcatatatcatgattcattattcttttatatggatatcatatctcatagtgagtatt 1059
Query: 360 tggcagaaggaaaaactggtaatcaaaaaaaaacaacgtgatcataaattaataaacgtt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1060 tggcagaaggaaaaactggtaatcaaaaaaaaacaacgtgatcataaattaataaacgtt 1119
Query: 420 acccggtttgaatcacgtgttaatcacgttcttgatagcccgccctgcgcctttcgtgtc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1120 acccggtttgaatcacgtgttaatcacgttcttgatagcccgccctgcgcctttcgtgtc 1179
Query: 480 ggcccccgtacggcttccgtttttttaggttcgtttcgttatttttcaactgatttcatt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1180 ggcccccgtacggcttccgtttttttaggttcgtttcgttatttttcaactgatttcatt 1239
Query: 540 caatagtttcaatttttgtcgattccgaa-gtttccctgttccccacgtcaagacagttg 598
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1240 caatagtttcaatttttgtcgattccgaaggtttccctgttccccacgtcaagacagttg 1299
Query: 599 cracttttttgtgatgagccgtcgcctttatagatcacaccagcgaaacagcttttcaca 658
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1300 caacttttttgtgatgagccgtcgcctttatagatcacaccagcgaaacagcttttcaca 1359
Query: 659 aagatacttctgttcactgtgttatcccatttcgataattaatagtaatgactctggcag 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1360 aagatacttctgttcactgtgttatcccatttcgataattaatagtaatgactctggcag 1419
Query: 719 tttggaaagctcaatagattgataaaaaaaaaactggttcttcaacttaaaagttgcgca 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1420 tttggaaagctcaatagattgataaaaaaaaaactggttcttcaacttaaaagttgcgca 1479
Query: 779 aaggaacgatgaaatatagatcagttaaataagtggtcttctctggaatactacagtatt 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1480 aaggaacgatgaaatatagatcagttaaataagtggtcttctctggaatactacagtatt 1539
Query: 839 ttt 841
|||
Sbjct: 1540 ttt 1542
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8799
Number of Sequences: 1807
Number of extensions: 8799
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 1
length of query: 841
length of database: 10,358,551
effective HSP length: 16
effective length of query: 825
effective length of database: 10,329,639
effective search space: 8521952175
effective search space used: 8521952175
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)